BastionHub | HMM Prediction Page

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HMM based prediction

HMM based models use HMMER to predict potential type I, II, III, IV and VI substrates based on homology to experimentally validated substrates. The predicted substrates (or non-substrates) can then be easily redirected to the BastionX server within the BastionHub pipeline for further, more accurate prediction.

Enter sequences

Examples

OR

You can upload a sequence file in the FASTA format: (example.fasta)

Usage: For common use

For benchmarking test

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